G.R. No. 230138. January 13, 2021

ST. MARY’S ACADEMY CALOOCAN CITY, INC., PETITIONER, OF VS. HON. KIM JACINTO S. HENARES, IN HER OFFICIAL CAPACITY AS THE COMMISSIONER OF INTERNAL REVENUE, HON. GERARDO R. FLOREND…

Decisions / Signed Resolutions January 13, 2021 THIRD DIVISION LEONEN, J.:


LEONEN, J.:


DECISION

LEONEN, J.:

It is the Court of Tax Appeals, and not the regional trial courts,
that has the jurisdiction to rule on the constitutionality and validity
of revenue issuances by the Commissioner of Internal Revenue.

This Court resolves a Petition for Review on Certiorari[1] assailing the Court of Appeals’ Decision[2] and Resolution[3] granting the appeal from the Order[4] and Resolution[5]
of the Regional Trial Court, which declared Revenue Memorandum Order
No. 20-2013 (RMO No. 20-2013) unconstitutional and Revenue Memorandum
Circular No. 52-2013 (RMC No. 52-2013) illegal.[6]

In July 2013, Commissioner of Internal Revenue Kim S. Jacinto­
Henares (Commissioner Jacinto-Henares) issued RMO No. 20-2013, which
provided the guidelines in the processing of tax exemption applications
and the re-validation of tax exemption rulings and certificates of
corporations listed under Section 30 of the National Internal Revenue
Code.[7]

A month later, Commissioner Jacinto-Henares issued RMC No. 52-2013,
which clarified the validity of unused and unissued principal and
supplementary receipts or invoices printed before January 18, 2013.[8]
The circular set deadlines for their validity; beyond the dates
specified, the receipts and invoices would no longer be valid. Thus,
taxpayers were required to secure new authority to print receipts or
invoices.[9]

On November 13, 2013, Revenue District Officer Rene Detablan
(Detablan) wrote a letter to St. Mary’s Academy of Caloocan City (St.
Mary’s Academy), informing it of its failure to apply for a new
authority to print. He also reminded the academy that under RMC No.
52-2013, its receipts were no longer valid as of October 31, 2013, and
that subsequent issuance ofreceipts starting November 1, 2013 without an
authority to print violated the National Internal Revenue Code. Thus,
Detablan demanded that St. Mary’s Academy pay the penalty should it fail
to show its new authority to print.[10]

In response, St. Mary’s Academy said that it was a non-stock, non­
profit educational institution that was “exempt from taxes and
duties[.]”[11] It cited
Revenue Ruling No. 159-98, which states that non-stock, non-profit
educational institutions were exempt from issuance of receipts and sales
invoices printed with the permission and stamp of the Bureau of
Internal Revenue.[12] Even if
this ruling were or would be revoked, St. Mary’s Academy maintained that
it would still not be compelled to apply for a new authority to print,
as that is only required for entities doing business.[13]

Detablan referred the matter to Regional Director Gerardo R.
Florendo (Florendo). Florendo, in tum, wrote St. Mary’s Academy saying
that it was not exempt from applying for a new authority to print He
explained that the regulation not only covers principal receipts and
invoices, but also supplementary ones such as delivery receipts,
collection receipts, and other documents, which St. Mary’s Academy
issues. The requirement was merely intended for recording, monitoring,
and control purposes.[14]

Florendo also insisted that St. Mary’s Academy had to renew its
application for tax exemption as a non-stock, non-profit educational
institution under RMO No. 20-2013.[15]
Thus, St. Mary’s Academy filed before the Regional Trial Court of
Quezon City a Petition for Injunction and Prohibition against
Commissioner Jacinto-Henares, Detablan, and Florendo. It alleged that as
a non-stock, non-profit educational institution, all its assets and
revenues “actually, directly, and exclusively used for educational
purposes”[16] were exempt from
internal revenue taxes. It also claimed that it was not engaged in
business and was not required to secure an authority to print receipts
and invoices Despite this, the Bureau of Internal Revenue required it to
surrender and destroy its official receipts and apply for a new
authority to print When it did not do so, the Bureau of Internal Revenue
allegedly imposed a penalty of P10,000.00 for non-registration, and an
additional penalty of P20,000.00 for every receipt printed without
authority.[18]

Thus, St. Mary’s Academy prayed that RMC No. 52-2013 and RMO No.
20-2013, insofar as they cover non-stock, non-profit educational
institutions, should be declared unconstitutional and illega.[19]

Defending the assailed issuances, Commissioner Jacinto-Henares,
Detablan, and Florendo countered that they were made pursuant to the
Commissioner’s rule-making power. Accordingly, they said that injunction
and prohibition are inapplicable remedies as they only apply to acts
done in the exercise of judicial, quasi-judicial, or ministerial
functions.[20] They prayed
that the Petition be dismissed for lack of merit and for violating the
doctrine of exhaustion of administrative remedies.[21]

The Republic of the Philippines, through the Office of the Solicitor
General, filed its separate Comment, saying that the Petition was
premature for raising no justiciable controversy. It argued that no
sanction has been imposed on St. Mary’s Academy at the time it filed the
case.[22]

On June 26, 2014, the Regional Trial Court issued an Order[23]
granting the prayer for preliminary injunction. It found that St.
Mary’s Academy did not need to apply for an authority to print since it
was not subject to internal revenue taxes and was not engaged in
business. It also ruled that Commissioner Jacinto-Henares had no
authority to amend provisions of the National Internal Revenue Code by
requiring additional documents before a tax-exempt entity such as St.
Mary’s Academy could enjoy this status.[24] The dispositive portion of the Order reads:

WHEREFORE, a Preliminary Injunction is hereby ISSUED to
refrain RESPONDENTS and/or any of its representatives and agents from
implementing Revenue Memorandum Circular No. 52-2013 and Revenue
Memorandum Order No. 20-2013 with respect to non-stock non-profit
educational institution, upon posting of the petitioner of a bond in the
amount of TWO MILLION PESOS (P2,000,000.00).

SO ORDERED.[25]

Commissioner Jacinto-Henares, Detablan, Flores, and the Republic moved
for reconsideration of the Order, while St. Mary’s Academy moved for the
submission of the case for decision on the merits.[26]

Subsequently, on October 10, 2014, the Regional Trial Court issued a Resolution[27] declaring the issuances unconstitutional. The dispositive portion of the Order reads:

WHEREFORE, premises considered, the Court orders:

1)
RMO
20-2013 is hereby declared as UNCONSTITUTIONAL insofar as it is made to
apply to non-stock and non-profit educational institutions and
2)
RMC
52-201[3] ILLEGAL insofar as it is made to apply to non-stock and
non-profit educational institutions as it is (sic) runs counter to
Sections 237 and 238 of the National Internal Revenue Code.

SO ORDERED.[28]

After a failed motion for reconsideration,[29] Commissioner Jacinto­ Henares, Detablan, Florendo, and the Republic lodged their appeal. In its August 31, 2016 Decision,[30]
the Court of Appeals granted the appeal and set aside the Regional
Trial Court’s Order and Resolution. It dismissed St. Mary’s Academy’s
Petition for injunction and prohibition.[31]

Preliminarily, the Court of Appeals held that Commissioner
Jacinto­Henares, in issuing the assailed issuances, was exercising her
rule-making power under Section 4 of the National Internal Revenue Code.
She “did not act in any judicial, quasi-judicial … or ministerial
capacity”;[32] hence, there
could not have been a violation of the rule on exhaustion of
administrative remedies, since this principle only applies when the
administrative agency concerned performs a quasi-judicial function.[33]

Nonetheless, the Court of Appeals ruled that St. Mary’s Academy’s
Petition should be dismissed. It held that Rule 58 and Rule 65 of the
Rules of Court say that injunction and prohibition, respectively, are
unavailing when the acts sought to be enjoined had already been
accomplished, as in the assailed issuances.[34]
Additionally, it noted that the writ of prohibition, which is directed
against judicial, quasi-judicial, and ministerial acts, cannot be issued
against the assailed issuances, which were issued pursuant to the
Commissioner’s quasi-legislative power.[35]

The dispositive portion of the Court of Appeals Decision reads:

WHEREFORE, the appeal is GRANTED. The assailed Order(s) in
Civil Case No. R-QZN-13-06083-CV are SET ASIDE for being null and void
and therein petition is DISMISSED. No costs.[36]

St. Mary’s Academy moved for reconsideration, but the Court of Appeals dismissed its Motion in its March 1, 2017 Resolution.[37] Hence, St. Mary’s Academy filed this Petition.[38]

Petitioner faults the Court of Appeals for deciding on the appeal
purely on procedural grounds and failing to tackle the substantive
issues.[39]

On procedural grounds, petitioner argues that “[t]he Court of Appeals
should have dismissed the appeal” since there was “no genuine issue of
fact presented.”[40]
Respondents, it says, only belatedly contrived on appeal that it failed
to exhaust administrative remedies so as to make it appear that a
factual issue was involved.[41]
Since the appeal only raised questions of law, the Court of Appeals
should have dismissed it outright, the proper remedy being a Rule 45
petition directly filed with this Court.[42]

Moreover, petitioner insists that it properly raised the question of
constitutionality through a petition for injunction and prohibition
because of the courts’ expanded powers of judicial review under the
Constitution. It maintains that courts now have the power to determine
grave abuse of discretion even when the act complained of was not done
in the exercise of judicial, quasi-judicial, or ministerial functions.[43]

Further, petitioner argues that courts exercising their expanded
judicial powers are not confined in cases for certiorari, but also in
petitions for prohibition.[44]
Thus, it asserts that while respondent Commissioner Jacinto-Henares
issued the regulations in her rule-making power, grave abuse of
discretion may still be abated and corrected in an action for injunction
and prohibition.[45] It
argues that the courts’ expanded power of judicial review is not
diminished even if the assailed act was done pursuant to a
quasi-legislative power.[46]

Petitioner further claims that it brought its case before the
Regional Trial Court pursuant to the doctrine of hierarchy of courts. It
says that it did so out of prudence in case a factual issue may arise;
but it turns out that there was none.[47]

On the substantive issues, petitioner maintains its tax-exempt
status as a non-stock, non-profit educational institution and how the
assailed regulations erode this privilege under Article XIV, Section
4(3) of the Constitution.[48]

Particularly, petitioner maintains the unconstitutionality of RMC No.
52-2013, insofar as it invalidates previous receipts or invoices, thus
requiring all institutions, including non-stock, non-profit educational
institutions, to apply for a new authority to print. The regulation, it
says, assumes that the institution applying for an authority to print is
already subject to internal tax revenue, and it is up to the
institution to prove its tax­ exempt status.[49]

Since the regulation imposes a penalty of P20,000.00 per transaction for receipts printed without an authority to print,[50]
petitioner claims that it would incur millions in penalty, more so as
it now uses computer-generated receipts for its transactions.[51]

Citing Commissioner of Internal Revenue v. VG. Sinco,[52]
petitioner asserts that respondent Commissioner cannot impose
additional requirements before a non-stock, non-profit educational
institution can enjoy its tax-exempt status.[53]
Petitioner cites a previous issuance, Department of Finance Order No.
137-87, which exempts non-stock, non-profit institutions from the
issuance of receipts and sales invoices.[54] This exemption, petitioner says, means they should not be required to apply for authority to print receipts or invoices.[55]

As to RMO No. 20-2013, which requires institutions to apply for tax
exemption rulings, petitioner insists that this is also impermissible
for imposing an additional requirement not found in the Constitution.[56]
It claims that it is already required to file an annual information
return, from which the Bureau of Internal Revenue can assess whether it
continues to operate as a non-stock, non-profit educational institution.[57]
This, it claims, is enough to safeguard the government’s interest, and
an additional requirement would be superfluous and unconstitutional.[58]
According to petitioner, its failure to secure a ruling under this
regulation would result in it losing its tax-exempt status, and would
subject it to income tax for all of its activities.[59]

Finally, petitiioner asserts that it has presented its clear and
unmistakable rights which are at risk of being violated by the
questioned regulations. Thus, the relief of injunction is proper.[60]

In their Comment[61] filed
by the Office of the Solicitor General, respondents mainly argue that
tax exemptions are strictly construed against the persons claiming them.
They say that enjoyment may be regulated to ensure that only those
entitled to it are granted exempt status.[62]

Moreover, respondents insist that the questioned issuances did not a1nend, alter, or modify the National Internal Revenue Code.[63]
They were issued only “for the orderly recording, monitoring and
control of receipts” issued by all entities, whether taxable or
tax-exempt.[64] To respondents, this is a policy decision in implementing tax laws, which is outside the scope of a court’s review powers.[65]

Respondents maintain that the questioned issuances “did not erode petitioner’s tax-exempt status”[66]
since any claims for tax exemption must be substantiated. The issuances
merely provided the framework for petitioner, and all other tax-exempt
entities similarly situated, to substantiate its claim for validation.[67]

The documentary submissions, respondents insist, are not additional requirements.[68]
These are only required for monitoring and recording purposes, and for
the State to examine whether the entities are still compliant with the
constitutional requirement for their enjoyment of their tax-exempt
status.[69] Respondents
further maintain that the issuances are reasonable regulations, as they
aim to prevent abuse of entities’ tax-exempt status by requiring them to
renew tax exemption rulings that cover them.[70]

Finally, respondents claim that petitioner has not shown a clear
legal right that it sought to be protected. According to them,
injunctions are not proper if the right asserted is dubious or is
disputed.[71]

The main issue for this Court’s resolution is whether or not RMO No.
20-2013 and RMC No. 52-2013 are constitutional and valid. Before
passing on this issue, however, this Court must first resolve whether or
not the Regional Trial Court had jurisdiction to hear this case.

Petitioner resorted to the remedy of injunction and prohibition which
it filed before the Regional Trial Court. While the use of this remedy
to question administrative tax issuances is proper, the forum where it
was filed is not. The Regional Trial Court does not have the power to
rule on the validity or constitutionality of the Commissioner of
Internal Revenue’s administrative issuances pertaining to the
enforcement of the National Internal Revenue Code. It is the Court of
Tax Appeals that has the jurisdiction to rule on these matters.

Jurisdiction is “the power and authority of a court to hear, try[,] and decide a case.”[72]
It is conferred by law. Questions on a court’s jurisdiction “may be
raised at any stage of the proceedings, even on appeal. In fact, courts
may take cognizance of the issue even if not raised by the parties
themselves.”[73]

Petitioner argues that the regular court has jurisdiction to rule on
the validity and constitutionality of administrative issuances.
However, the law creating the Court of Tax Appeals is clear. Republic
Act No. 1125, as amended by Republic Act No. 9282, states in Section 7:

SECTION 7. Jurisdiction. – The Court of Tax Appeals shall exercise:

(a) exclusive appellate jurisdiction to review by appeal, as herein provided:

(1)
Decisions
of the Commissioner of Internal Revenue in cases involving disputed
assessments, refunds of internal revenue taxes, fees or other charges,
penalties imposed in relation thereto, or other matters arising under
the National Internal Revenue Code or other law or part of Law
administered by the Bureau of Internal Revenue[.]

This Court has previously applied this provision to emphasize that it
is the Court of Tax Appeals, and not the regional trial courts, that
has jurisdiction over questions on the validity of tax issuances by the
Commissioner of Internal Revenue.

In Blaquera v. Rodriguez,[74]
a taxpayer filed a complaint before the Court of First Instance seeking
to enjoin the Collector of Internal Revenue from collecting deficiency
percentage taxes and from levying on execution any of the taxpayer’s
property to satisfy the tax liability. This Court ruled that the Court
of First Instance did not have jurisdiction to hear the case; instead,
it should have been brought on appeal to the Court of Tax Appeals,
pursuant to Section 7 ofRepublic Act No. 1125.

In Commissioner of Internal Revenue v. Leal,[75]
the taxpayer questioned, through a petition for prohibition filed
before the Regional Trial Court, a revenue memorandum order and a
revenue memorandum circular that imposed lending investor’s tax on
pawnshops and subjected pawn tickets to documentary stamp tax. Leal
again applied Section 7 of Republic Act No. 1125 to emphasize that the
jurisdiction over these cases questioning the Commissioner oflnternal
Revenue’s issuances lies with the Court of Tax Appeals, not the regular
courts. This Court declared the Regional Trial Court’s ruling as void
for being issued without jurisdiction.[76]

Subsequently, in Asia International Auctioneers v. Parayno,[77]
the issue on jurisdiction again arose when a taxpayer questioned a
revenue memorandum circular before the Regional Trial Court and prayed
for its nullity. Citing both Blaquera and Leal, this Court
reiterated that the Court of Tax Appeals has exclusive jurisdiction to
review rulings or opinions of the Commissioner of Internal Revenue. It
then refused to rule on the merits, saying it “would only prove futile.
Having declared the court a quo without jurisdiction over the subject matter of the instant case, any further disquisition would be obiter dictum.”[78]

However, a year after Asia International Auctioneers, this Court decided British American Tobacco v. Camacho,[79]
which petitioner cites as authority. There, this Court allowed the
taxpayer to question revenue regulations and a revenue memorandum
circular before the Regional Trial Court through a petition for
injunction, as the Court of Tax Appeals’ jurisdiction does not include
cases where the constitutionality of a law or rule is challenged. Thus:

Where what is assailed is the validity or constitutionality
of a law, or a rule or regulation issued by the administrative agency in
the performance of its quasi-legislative function, the regular courts
have jurisdiction to pass upon the same.[80]

British American Tobacco was a deviation from the rulings in Blaquera, Leal, and Asia International Auctioneers.

This conflict has been resolved in Banco de Oro v. Republic.[81] Banco de Oro acknowledged the deviation and reverted to the earlier rulings in Blaquera, Leal, and Asia International Auctioneers. This Court said:

The Court of Tax Appeals has exclusive jurisdiction to determine the
constitutionality or validity of tax laws, rules and regulations, and
other administrative issuances of the Commissioner of Internal Revenue.[82]

This is now the prevailing rule, as affirmed m COURAGE v. Commissioner of Internal Revenue.[83]

Thus, when petitioner filed its Petition before the Regional Trial
Court to question the constitutionality and validity of RMO No. 20-2013
and RMC No. 52-2013, it brought its case before the wrong court. The
Regional Trial Court did not have jurisdiction to pass upon such issues,
as it is the Court of Tax Appeals that can decide on them.

Consequently, the Regional Trial Court’s Resolution declaring RMO No.
20-2013 as unconstitutional and RMC No. 52-2013 as invalid is void. It
was then incorrect for the Court of Appeals to rule on the propriety of
issuing an injunction or a writ of prohibition, as the case should have
been dismissed outright by the Regional Trial Court for lack of
jurisdiction.

Before this Court exercises its review powers, especially when the
issue involves the constitutionality and validity of an act of a
co-equal branch of government, the case must first be heard on both the
law and the facts by the appropriate trial court. The law has determined
this to be the Court of Tax Appeals.

WHEREFORE, the Petition is DENIED.

SO ORDERED.

Hernando, Inting, Delos Santos, and Rosario, JJ., concur.


[1] Rollo, pp. 10-68.

[2] Id. at 70-84. The
August 31, 2016 Decision was penned by Associate Justice Normandie B.
Pizarro, and concurred in by Associate Justices Samuel H. Gaerlan (now a
member of this Court) and Ma. Luisa C. Quijano-Padilla of the
Thirteenth Division, Court of Appeals, Manila.

[3] Id. at 129-131. The
March 1, 2017 Resolution was penned by Associate Justice Normandie B.
Pizarro, and concurred in by Associate Justices Samuel H. Gaerlan (now a
member of this Court) and Ma. Luisa C. Quijano-Padilla of the
Thirteenth Division, Court of Appeals, Manila.

[4] Id. at 240-242. The
June 26, 2014 Order was penned by Presiding Judge Lita S.
Tolentino-Genilo of the Regional Trial Court of Quezon City, Branch 91.

[5] Id. at 243-245. The
October 10, 2014 Resolution was penned by Presiding Judge Lita S.
Tolentino­ Genilo of the Regional Trial Court of Quezon City, Branch 91.

[6] Id. at 71.

[7] Id.

[8] Id.

[9] Id. at 71-72.

[10] Id. at 72.

[11] Id.

[12] Id. at 192.

[13] Id. at 192-193.

[14] Id. at 72.

[15] Id. at 73.

[16] Id. at 73.

[17] Id.

[18] Id.

[19] Id.

[20] Id. at 74.

[21] Id.

[22] Id.

[23] Id. at 240-242.

[24] Id. at 75.

[25] Id. at 242.

[26] Id. at 75.

[27] Id. at 243-245.

[28] Id. at 244-245.

[29] Id. at 251.

[30] Id. at 70-84.

[31] Id. at 83.

[32] Id. at 80.

[33] Id. at 80-81.

[34] Id. at 81-82.

[35] Id. at 82.

[36] Id. at 83-84.

[37] Id. at 129-131.

[38] Id. at 10-68.

[39] Id. at 28.

[40] Id.

[41] Id. at 29.

[42] Id. at 30-31.

[43] Id. at 32-33.

[44] Id. at 33-34.

[45] Id.

[46] Id. at 38.

[47] Id. at 36.

[48] Id. at 55.

[49] Id.

[50] Id. at 59.

[51] Id.

[52] 100 Phil. 127 (1956) [Per. J. Bautista Angelo, En Banc].

[53] Rollo, p. 53.

[54] Id. at 54.

[55] Id.

[56] Id. at 55.

[57] Id. at 56.

[58] Id. at 57.

[59] Id. at 59.

[60] Id. at 58.

[61] Id. at 337-352.

[62] Id. at 341.

[63] Id. at 340.

[64] Id. at 342.

[65] Id.

[66] Id. at 344.

[67] Id.

[68] Id. at 345.

[69] Id.

[70] Id. at 346.

[71] Id. at 347.

[72] Asia International Auctioneers v. Parayno, 565 Phil. 255, 265 (2007) [Per C.J. Puno, First Division].

[73] Id.

[74] 103 Phil. 511 (1958) [Per J. Endeneia. En Banc].

[75] 440 Phil. 477 (2002) [Per J. Sandoval-Gutierrez. Third Division].

[76] Id. at 488.

[77] 565 Phil. 255 (2007) [Per CJ. Puno, First Division].

[78] Id. at 271.

[79] 584 Phil. 489 (2008) [Per J. Ynares-Santiago, En Banc].

[80] Id. at 511.

[81] 793 Phil. 97 (2016) [Per J. Leonen, En Banc].

[82] Id. at 118.

[83] 835 Phil. 298 (2018) [Per J. Caguioa, En Banc].